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All issues Volume 35 (2022) Aquat. Living Resour., 35 (2022) 4 References
Open Access
Issue
Aquat. Living Resour.
Volume 35, 2022
Article Number 4
Number of page(s) 14
DOI https://doi.org/10.1051/alr/2022004
Published online 24 May 2022
  • Alam MM. De Croos MDST, Pálsson S. 2017. Mitochondrial DNA variation reveals distinct lineages in Penaeus semisulcatus (Decapoda, Penaeidae) from the Indo‐West Pacific Ocean. Mar Ecol 38: e12406. [CrossRef] [Google Scholar]
  • Alam MMM, Westfall KM, Pálsson S. 2016. Mitogenomic variation of Bangladesh Penaeus monodon (Decapoda, Penaeidae) and reassessment of its phylogeography in the Indo-West Pacific region. Hydrobiology 763: 249–265. [CrossRef] [Google Scholar]
  • Bernardi G, Azzurro E., Golani D, Miller MR. 2016. Genomic signatures of rapid adaptive evolution in the bluespotted cornetfish, a Mediterranean Lessepsian invader. Mol Ecol 25: 3384–3396. [CrossRef] [PubMed] [Google Scholar]
  • Boudouresque CF. 1999. The Red Sea-Mediterranean link: unwanted effects of canals, in Invasive species and biodiversity management, edited by O.T. Sandlund, P.J. Schei, A. Viken. Kluwer Academic Publishers, pp 213–228. [CrossRef] [Google Scholar]
  • Darriba D, Taboada GL, Doallo R, Posada D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nat Methods 9: 772–772. [CrossRef] [PubMed] [Google Scholar]
  • D'Incao, F., Delevedove G., Maggioni D.E., Maggioni R. 1998. Evidência genética da presença de Farfantepenaeus paulensis (Pérez Farfante, 1967) no litoral nordeste do Brasil (Decapoda: Penaeidae). Nauplius 6: 129–137. [Google Scholar]
  • Ditty J.G. 2014. Sternal spines in penaeid postlarvae (Decapoda: Penaeidae): life-phase-specific and systematically significant? J Crust Biol 34: 618–628. [CrossRef] [Google Scholar]
  • Dore I., Frimodt C. 1987. Penaeus semisulcatus, in An Illustrated Guide to Shrimp of the World 1987. Van Nostrand Reinhold, New York: Library of Congress Catalog Card Number 87-1399, pp. 168–169. [Google Scholar]
  • Du X., Cai S., Yu C., Jiang X., Lin L., Gao T., Han Z. 2016. Population genetic structure of mantis shrimps Oratosquilla oratoria: testing the barrier effect of the Yangtze River outflow. Biochem Syst Ecol 66: 12–18. [CrossRef] [Google Scholar]
  • El-Aiatt A.A., Shalloof K.A.S., Saber M.M. 2019. Bio-economic studies on the catch of Bardawil Lagoon, North Sinai, Egypt. Egypt J Aquat Res 45: 59–65. [CrossRef] [Google Scholar]
  • El-Ganainy A.A., Yassien M.H. 2012. The population biology of penaeid prawns in the Gulf of Suez, Red Sea, Egypt. Mar Biol Res 8: 405–411. [CrossRef] [Google Scholar]
  • Excoffier L., Lischer H.E. 2010. Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Res 10: 564–567. [CrossRef] [PubMed] [Google Scholar]
  • Excoffier L., Smouse P.E., Quattro J.M. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479–491. [CrossRef] [PubMed] [Google Scholar]
  • Folmer O., Black M., Hoeh W., Lutz R., Vrijenhoek R. 1994. DNA primers for amplification of mitochondrial cytochrome C oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol 3: 294–299. [PubMed] [Google Scholar]
  • Fu Y.-X. 1997. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147: 915–925. [CrossRef] [PubMed] [Google Scholar]
  • Grant W.A.S., Bowen B.W. 1998. Shallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lessons for conservation. J Hered 89: 415–426. [CrossRef] [Google Scholar]
  • Halim S.A.A.A., Othman A.S., Akib N.A.M., Jamaludin N.A., Esa Y., Nor S.A.M. 2021. Mitochondrial Markers Identify a Genetic Boundary of the Green Tiger Prawn (Penaeus semisulcatus) in the Indo-Pacific Ocean. Zool Stud 60: e8. [PubMed] [Google Scholar]
  • Han Z., Zhu W., Zheng W., Li P., Shui B. 2105. Significant genetic differentiation between the Yellow Sea and East China Sea populations of cocktail shrimp Trachypenaeus curvirostris revealed by the mitochondrial DNA COI gene. Biochem Syst Ecol 59: 78–84. [Google Scholar]
  • Harpending H. 1994. Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution. Hum Biol 591–600. [PubMed] [Google Scholar]
  • Hassanien H.A., Al-Rashada, Y. 2019. Estimation of genetic variation in green tiger prawn, Penaeus semisulcatus by using random amplified polymorphic DNA, inter simple sequence repeat and simple sequence repeat markers. Aquac Res 50: 1626–1633. [CrossRef] [Google Scholar]
  • Hualkasin W., Sirimontaporn P., Chotigeat W., Querci J., Phongdara A. 2003. Molecular phylogenetic analysis of white prawns species and the existence of two clades in Penaeus merguiensis. J Exp Mar Biol Ecol 296: 1–11. [CrossRef] [Google Scholar]
  • Jahromi S.T., Othman A.S., Rosazlina R. 2019. Morphometrics and mitochondrial DNA genes analysis suggest a new species of Penaeus (Crustacea: Penaeidae) from the Persian Gulf. Biochem Genet 57: 193–213. [CrossRef] [PubMed] [Google Scholar]
  • Kasim N.S., Jaafar T.N.A.M., Piah R.M., Arshaad W.M., Nor S.A.M., Habib A., Abd Ghaffar M., Sung Y.Y., Danish-Daniel M., Tan M.P. 2020. Recent population expansion of longtail tuna Thunnus tonggol (Bleeker, 1851) inferred from the mitochondrial DNA markers. PeerJ 8: e9679. [CrossRef] [PubMed] [Google Scholar]
  • Kiparissis S., Peristeraki P., Tampakakis K., Kosoglou I., Doudoumis V., Batargias C. 2018. Range expansion of a restricted lessepsian: westbound expansion breakthrough of Lagocephalus spadiceus (Richardson, 1844)(Actinopterygii: Tetraodontidae). Bioinvasions Rec 7. [Google Scholar]
  • Lefebure T., Douady C.J., Gouy M., Gibert J. 2006. Relationship between morphological taxonomy and molecular divergence within Crustacea: Proposal of a molecular threshold to help species delimitation. Mol Phylogenet Evol 40: 435–447. [CrossRef] [PubMed] [Google Scholar]
  • Maggioni R., Rogers A.D., MacLean N., D'Incao, F. 2001. Molecular phylogeny of western Atlantic Farfantepenaeus and Litopenaeus shrimp based on mitochondrial 16S partial sequences. Mol Phylogenet Evol 18: 66–73. [CrossRef] [PubMed] [Google Scholar]
  • Mwakosya C.A., Mgaya Y.D., Jiddawi N.S. 2018. Genetic connectivity of Fenneropenaeus indicus (H. Milne Edwards 1837) among three prawn fishing grounds of Tanzanian coastal waters. Reg Stud Mar Sci 24: 107–112. [Google Scholar]
  • Niamaimandi N., Aziz A., Siti Khalijah D., Che Roos S., Kiabi B. 2008. Reproductive biology of the green tiger prawn (Penaeus semisulcatus) in coastal waters of Bushehr, Persian Gulf. ICES Mar Sci 65: 1593–1599. [CrossRef] [Google Scholar]
  • Pezy J.P., Baffreau A., Dauvin J.C. 2017. Records of two introduced Penaeidae (Crustacea: Decapoda) species from Le Havre Harbour, France, English Channel. Bioinvasions Rec 6: 363–367. [CrossRef] [Google Scholar]
  • Rabaoui L., Lin Y.J., Maneja R.H., Qurban M.A., Abdurahiman P., Premlal P., Al-Abdulkader K., Roa-Ureta R.H. 2017. Nursery habitats and life history traits of the green tiger shrimp Penaeus semisulcatus (De Haan, 1844) in the Saudi waters of the Arabian Gulf. Fish Res 195: 1–11. [CrossRef] [Google Scholar]
  • Ragonese S., Giusto G. 2011. Deep water occurrence of Penaeus semisulcatus De Haan, 1850, in the North Levant (Eastern Mediterranean Sea)(Crustacea: Decapoda: Penaeidae). Zool Middle East 54: 141–143. [CrossRef] [Google Scholar]
  • Rambaut A., Drummond A.J., Xie D., Baele G., Suchard M.A. 2018. Posterior summarization in Bayesian phylogenetics using Tracer 1.7. System Biol 67: 901. [CrossRef] [PubMed] [Google Scholar]
  • Ramos-Onsins S.E., Rozas J. 2002. Statistical properties of new neutrality tests against population growth. Mol Biol Evol 19: 2092–2100. [CrossRef] [PubMed] [Google Scholar]
  • Ronquist F., Teslenko M., Van Der Mark P., Ayres D.L., Darling A., Höhna S., Larget B.L., Liang, Suchard M.A.; Huelsenbeck J.P. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61: 539–542. [CrossRef] [PubMed] [Google Scholar]
  • Rozas J., Ferrer-Mata A., Sánchez-DelBarrio J.C., Guirao-Rico S., Librado P., Ramos-Onsins S.E., Sánchez-Gracia A. 2017. DnaSP 6: DNA sequence polymorphism analysis of large data sets. Mol Biol Evol 34: 3299–3302. [CrossRef] [PubMed] [Google Scholar]
  • Saher N., Matloob T., Aziz L., Awan A., Farooqi S. 2021. Adaptation of VB (Vartan Bhanji) in urban centers: tracking signs of cultural lag in an evolving Pakistan. Ilkogretim Online 20. [Google Scholar]
  • Sharawy Z., Abbas E.M., Desouky M.G., Kato M. 2016. Descriptive analysis and molecular identification of the green tiger shrimp Penaeus semisulcatus (De Haan, 1844) in Suez Gulf, Red Sea. Int J Fish Aquat Stud 4: 426–432. [Google Scholar]
  • Sharawy Z.Z., Abbas E.M., Khafage A.R., Galal-Khallaf A., Ismail R.F., Ahmed H.O., Mohammed-Geba K., Kato M. 2017. Descriptive analysis, DNA barcoding and condition index of Penaeids (Crustacea: Decapoda) from the Egyptian Mediterranean coast. Fish Res 188: 6–16. [CrossRef] [Google Scholar]
  • Soyel H.I., Kumlu, M. 2003. The effects of salinity on postlarval growth and survival of Penaeus semisulcatus (Decapoda: Penaeidae). Turk J Zool 27: 221–225. [Google Scholar]
  • Tajima F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585–595. [PubMed] [Google Scholar]
  • Tamura K., Stecher G., Kumar S. 2021. MEGA11: molecular evolutionary genetics analysis version 11. Mol Biol Evol 38: 3022–3027. [CrossRef] [PubMed] [Google Scholar]
  • Tavares C., Gusmão J. 2016. Description of a new Penaeidae (Decapoda: Dendrobranchiata) species, Farfantepenaeus isabelae sp. nov. Zootaxa 4171: 505–516. [CrossRef] [PubMed] [Google Scholar]
  • Teodoro S.S.A., da Silva Cortinhas M.C., Proietti M.C., Costa R.C., Dumont L.F.C. 2020. High genetic connectivity among pink shrimp Farfantepenaeus paulensis (Pérez-Farfante, 1967) groups along the south-southeastern coast of Brazil. Estuar Coast Shelf Sci 232: 106488. [CrossRef] [Google Scholar]
  • Tsoi K.H., Ma K.Y., Wu T.H., Fennessy S.T., Chu K.H., Chan T.Y. 2014. Verification of the cryptic species Penaeus pulchricaudatus in the commercially important kuruma shrimp P. japonicus (Decapoda: Penaeidae) using molecular taxonomy. Invertebr Syst 28: 476–490. [CrossRef] [Google Scholar]
  • Walsh P.S., Metzger D.A., Higuchi R. 1991. Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. Biotechniques 10: 506–513. [PubMed] [Google Scholar]
  • Wang P., Chen B., Zheng J., Cheng W., Zhang H., Wang J., Su Y., Xu P., Mao Y. 2020. Fine-Scale Population Genetic Structure and Parapatric Cryptic Species of Kuruma Shrimp (Marsupenaeus japonicus), Along the Northwestern Pacific Coast of China. Front Genet 11: 118. [CrossRef] [PubMed] [Google Scholar]
  • Witt J.D.S., Threloff D.L., Hebert P.D.N. 2006. DNA barcoding reveals extraordinary cryptic diversity in an amphipod genus: Implications for desert spring conservation. Mol Ecol 15: 3073–3082. [CrossRef] [PubMed] [Google Scholar]
  • WoRMS. 2021. Penaeus semisulcatus De Haan, 1844 [in De Haan, 1833-1850. Accessed at: http://marinespecies.org/aphia.php?p=taxdetails&id=107112 on 2021-05-28]. [Google Scholar]
  • Xu D., Lou B., Shi H., Geng Z., Li S., Zhang Y. 2012. Genetic diversity and population structure of Nibea albiflora in the China Sea revealed by mitochondrial COI sequences. Biochem Syst Ecol 45: 158–165. [CrossRef] [Google Scholar]
  • Yousif A. 2003. Diel variability of size and catch rate of three fish species and three penaeid prawns in the NW Red Sea trawl fishery. Fish Res 63: 265–274. [CrossRef] [Google Scholar]

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