Free Access
Issue
Aquat. Living Resour.
Volume 18, Number 3, July-September 2005
Page(s) 301 - 311
DOI https://doi.org/10.1051/alr:2005034
Published online 15 November 2005
  • Beach D., 2002, Coastal Sprawl: The effects of urban design on aquatic ecosystems in the United States. Pew Oceans Commission, Arlington, VA. [Google Scholar]
  • Bellwood D.R., Hughes T.P., Folke C., Nystroem M., 2004, Confronting the coral reef crisis. Nature 429, 827-833. [CrossRef] [PubMed] [Google Scholar]
  • Boesch D.F., Armstrong N.E., D'Elia C.F., Maynard N.G., Pearl H.N., Williams S.L., 1993, Deterioration of the Florida Bay ecosystem: an evaluation of the scientific evidence. Report to the Interagency Working Group on Florida Bay, U.S. Dept. Interior, National Park Service, Washington, DC. [Google Scholar]
  • Botsford L.W., 1997, The management of fisheries and marine ecosystems. Science 275, 509-511. [CrossRef] [Google Scholar]
  • Boyer J.N., Fourqurean J.W., Jones R.D., 1999, Seasonal and long-term trends in the water quality in Florida Bay (1989-1997). Estuaries 22, 417-430. [CrossRef] [Google Scholar]
  • Breitburg D.L., Rose K.A., Cowan J.H. Jr., 1999, Linking water quality to larval survival predation mortality of fish larvae in an oxygen-stratified water column. Mar. Ecol. Prog. Ser. 178, 39-54. [CrossRef] [Google Scholar]
  • Breitburg D.L., Adamack A., Rose K.A., Kolesar S.E., Decker M.B., Purcell J.E., Keister J.E., Cowen J.H., Jr., 2003, The pattern and influence of low dissolved oxygen in the Patuxent River, a seasonally hypoxic estuary. Estuaries 26, 280-297. [CrossRef] [Google Scholar]
  • Browder J.A., Restrepo V.R., Rice J.K., Robblee M.B., Zein-Eldin Z., 1999, Environmental influences on potential recruitment of pink shrimp, Farfantepenaeus duorarum, from Florida Bay nursery grounds. Estuaries 22, 484-499. [CrossRef] [Google Scholar]
  • Butler M.J. IV, Dolan T.W., Herrnkind W.F., Hunt J.H., 2001, Modeling the effect of spatial variation in postlarval supply and habitat structure on recruitment of Caribbean spiny lobster. Mar. Freshw. Res. 52, 1243-1252. [CrossRef] [Google Scholar]
  • Butler M.J. IV., 2003, Incorporating ecological process and environmental change into spiny lobster population models using a spatially-explicit, individual-based approach. Fish. Res. 63, 65-79. [Google Scholar]
  • Butler M.J. IV, Dolan T.W., Hunt J.H., Rose K.A., Herrnkind W.F., 2005, Recruitment in degraded marine habitats: a spatially-explicit, individual-based model for spiny lobster. Ecol. Appl. 15, 902-918. [CrossRef] [Google Scholar]
  • Carlson P.R., Yarboro L.A., Barber T.R., 1994, Relationship of sediment sulfide to mortality of Thalassia testudinum in Florida Bay. Bull. Mar. Sci. 54, 733-746. [Google Scholar]
  • Carlton J.T., 1999, The scale and ecological consequences of biological invasions in the world's oceans. In: Sandlund O.T., Schei P.J., Viken A. (Eds.), Invasive Species and Biodiversity Management. Dordecht, Kluwer Academic Publishers. [Google Scholar]
  • Caswell H., 2000, Matrix Population Models, 2nd edition, Sinauer Assoc. Publ., Sunderland, Mass. [Google Scholar]
  • Christensen V., Pauly D., 1993, Trophic models of aquatic ecosystems. ICLARM Conf. Proc. 26. [Google Scholar]
  • Christiansen, et al. 1996, Report of Ecological Society of America on the scientific basis for ecosystem management. Ecol. Appl. 6, 665-691. [Google Scholar]
  • DeAngelis D.L., Barnthouse L.W., Winkle W., Otto R.G., 1990, A critical appraisal of population approaches in assessing fish community health. J. Great Lakes Res. 16, 576-590. [CrossRef] [Google Scholar]
  • DeAngelis D.L., Gross L.J., 1992, Individual-based Models and Approaches in Ecology. New York, Chapman and Hall. [Google Scholar]
  • DeAngelis D.L., Bellmund S., Mooij W.M., Nott M.P., Comiskey E.J., Gross L.J., Huston W.F. Wolff M.A., 2002, Modeling ecosystem and population dynamics on the south Florida Hydroscape. In: J.W. Porter, K.G. Porter (Eds.) The Everglades, Florida Bay, and Coral Reefs of the Florida Keys: an Ecosystem Sourcebook. New York, NY, CRC Press, pp. 239-258. [Google Scholar]
  • Durako M.D., Kuss K.M., 1994, Effects of Labryinthula infection on the photosynthetic capacity of Thalassia testudinum. Bull. Mar. Sci. 54, 727-732. [Google Scholar]
  • Elmqvist J., Folke C., Nystroem M., Peterson G., Bengtsson J., Walker B., Norberg J., 2003, Response diversity, ecosystem change, and resilience. Front. Ecol. Environ. 1, 488-499. [CrossRef] [Google Scholar]
  • Flaaten O., Salvanas A.G.V., Schweder T., Ulltang O. (Eds.), 1998, Objectives and uncertainty in fisheries management with emphasis on three North Atlantic ecosystems. Fish. Res. 37, 1-6. [Google Scholar]
  • Fourqurean J.W., Robblee M.B., 1999, Florida Bay: a history of recent ecological changes. Estuaries 22, 345-357. [CrossRef] [Google Scholar]
  • Food and Agriculture Organization of the United Nations., 2002, The State of the World Fisheries and Aquaculture, Rome. [Google Scholar]
  • GESAMP, 1990, (Joint Group of Experts on the Scientific Aspects of Marine Environmental Protection). The State of the Marine Environment. Oxford, Blackwell Scientific. [Google Scholar]
  • Grimm V., 1999, Ten years of individual-based modeling in ecology: what have we learned and what could we learn in the future? Ecol. Model. 115, 129-148. [CrossRef] [Google Scholar]
  • Jackson J.B.C., Kirby M.X., Berger W.H., Bjorndal K.A., Botsford L.W., Bourque B.J., Bradbury R.H., Cooke R., Erlandson J., Estes J.A., Estes T.P., Hughes T.P., Kidwell S., Lange C.B., Lenihan H.S., Pandolfi J.M., Peterson C.H., Steneck R.S., Tegner M.J., Warner R.R., 2001, Historical overfishing and the recent collapse of coastal ecosystems. Science 293, 629-638. [Google Scholar]
  • Jackson J.B.C., 2001, What was natural in the coastal oceans? Proc. Nat. Acad. Sci. USA 98, 5411-5418. [CrossRef] [Google Scholar]
  • Jaworska J.S., Rose K.A., Barnthouse L.W., 1997, General response patterns of fish populations to stress: an evaluation using an individual-based simulation model. J. Aquat. Ecosyst. Stress Recov. 6, 15-31. [CrossRef] [Google Scholar]
  • Jennings S., Polunin N.V.C., 1997, Impacts of predator depletion by fishing on the biomass and diversity of non-target reef fish communities. Coral Reefs 16, 71-82. [CrossRef] [Google Scholar]
  • Jennings S., Kaiser M.J., 1998, Effect of fishing on marine ecosystems. Adv. Mar. Biol. 34, 203-354. [Google Scholar]
  • Jury S.H., Kinnison M.T., Howell W.H., Watson W.H. III, 1994, The effects of reduced salinity on lobster (Homarus americanus Milne-Edwards) metabolism: implications for estuarine populations. J. Exp. Mar. Biol. Ecol. 176, 167-185. [CrossRef] [Google Scholar]
  • Larkin P.A., 1996, Concepts and issues in marine ecosystem management. Rev. Fish. Biol. Fish. 6, 139-164. [Google Scholar]
  • LePage C., Cury P., 1997, Population viability and spatial fish reproductive strategies in constant and changing environments: an individual-based modeling approach. Can. J. Fish. Aquat. Sci. 54, 2235-2246. [CrossRef] [Google Scholar]
  • Lynch T.C., Phlips E.J., 2000, Filtration of the bloom-forming cyanobacteria Synechococcus by three sponge species from Florida Bay, USA. Bull. Mar. Sci. 67, 923-1213. [Google Scholar]
  • Mazeaud M.M., Mazeaud M.F., Donaldson E.M., 1977, Primary and secondary effects of stress in fish: Some new data and a general review. Trans. Am. Fish. Soc. 106, 201-222. [CrossRef] [Google Scholar]
  • Megrey B.A., Hinckley S., Dobbins E.L., 2002, Using scientific visualization tools to facilitate analysis of multi-dimensional data from a spatially-explicit, biophysical, individual-based model of marine fish early life history. ICES J. Mar. Sci. 59, 203-215. [CrossRef] [Google Scholar]
  • Mooney H.A. (ed), 1998, Ecosystem management for sustainable marine fisheries. Ecol. Appl. 8. [Google Scholar]
  • Moore H.B., 1972, Aspects of stress in the tropical marine environment. Adv. Mar. Biol. 10, 217-269. [CrossRef] [Google Scholar]
  • National Research Council., 1994, Priorities for Coastal Ecosystem Science. Washington, DC National Academy Press. [Google Scholar]
  • Nixon S.W., 1995, Coastal marine eutrophication: a definition, social causes, and future concerns. Ophelia 41, 199-219. [Google Scholar]
  • Nuttle W.K., Fourqurean J.W., Cosby B.J., Zieman J.C., Robblee M.B., 2000, Influence of net freshwater supply on salinity in Florida Bay. Water Resour. Res. 36, 1805-1822. [CrossRef] [Google Scholar]
  • Pauly D., Soriano-Bartz M.L., Palomares M.D.L., 1993, Improved construction, parameterization, and interpretation of steady-state ecosystem models. In: Christensen V., Pauly D. (eds.), Trophic Models of Aquatic Ecosystems. ICLARM Conf. Proc. 26, 1-13. [Google Scholar]
  • Palumbi S.R., 2001, Humans as the worlds greatest evolutionary force. Science 293, 1786-1790. [CrossRef] [PubMed] [Google Scholar]
  • Phlips E.J., Badylak S., Lynch T.C., 1999, Blooms of the picoplanktonic cyanobacterium Synechococcus in Florida Bay, a subtropical inner-shelf lagoon. Limnol. Oceanogr. 44, 1166-1175. [CrossRef] [Google Scholar]
  • Porter J.W., Porter K.G., 2002, The Everglades, Florida Bay, and Coral Reefs of the Florida Keys: An Ecosystem Sourcebook. New York, NY, CRC Press. [Google Scholar]
  • Rose K.A., 2000, Why are quantitative relationships between environmental quality and fish populations so elusive? Ecol. Appl. 10, 367-385. [Google Scholar]
  • Ruiz G.M., Fonfonoff P.W., Carlton J.T., Wonhom M.J., Hines A.H., 2000, Invasion of coastal marine communities in North America: apparent patterns, processes, and biases. Ann. Rev. Ecol. Syst. 31, 481-531. [CrossRef] [Google Scholar]
  • Scheffer M., Carpenter S., Foley J.A., Folke C., Walker B., 2001, Catastrophic shifts in ecosystems. Nature 413, 591-596. [CrossRef] [PubMed] [Google Scholar]
  • Schreck C.B., 1999, Physiological, behavioral, and performance indicators of stress. Am. Fish. Soc. Symp. 8, 29-37. [Google Scholar]
  • Steyaert L.T., Loveland T.R., Parton W.J., 1997, Land cover characterization and land surface parameterization research. Ecol. Appl. 7, 1-2. [Google Scholar]
  • Stockhausen W.T., Lipcius R.N., Hickey B.M., 2000, Joint effects of larval dispersal, population regulation, marine reserve design, and exploitation on production and recruitment in the Caribbean spiny lobster. Bull. Mar. Sci. 66, 957-990. [Google Scholar]
  • Stoneman-Douglas M., 1994, The River of Grass. Pineapple Press, FL. 50th Anniversary Ed, reprinted 1997. [Google Scholar]
  • Strickland R., Grosse D.J., 2000, Fisheries, habitat, and pollution. Ecol. Appl. 10, 323-324. [CrossRef] [Google Scholar]
  • Uchmanski J., Grimm V., 1996, Individual-based modeling in ecology: what makes the difference. Trend Ecol. Evol. 11, 437-441. [CrossRef] [Google Scholar]
  • US Ocean Commission., 2004, An Ocean Blueprint for the 21st Century. Final Report of the US Commission on Ocean Policy, Washington, DC; which can be accessed at: http://oceancommission.gov/documents/ prepub_report/welcome.html [Google Scholar]
  • Van Winkle W., Rose K.A., Winemiller K.O., DeAngelis D.L., Christensen S.W., Otto R.G., Shuter B.J., 1993, Linking life history theory, environmental setting, and individual-based modeling to compare responses of different fish species to environmental change. Trans. Am. Fish. Soc. 12, 459-466. [CrossRef] [Google Scholar]
  • Walters C.J., Gunderson L., Holling C.S., 1992, Experimental policies for water management in the Everglades. Ecol. Appl. 2, 189-202. [CrossRef] [PubMed] [Google Scholar]
  • Werner F.E., Quinlan J.A., Gregory-Lough R., Lynch D.R., 2001, Spatially-explicit individual based modeling of marine populations: a review of the advances in the 1990s. Sarsia 86, 411-421. [Google Scholar]
  • Zieman J.C., Fourqurean J.W., Frankovich T.A., 1999, Seagrass die-off in Florida Bay: long-term trends in abundance and growth of turtlegrass, Thalassia testudinum. Estuaries 22, 460-470. [CrossRef] [Google Scholar]

Current usage metrics show cumulative count of Article Views (full-text article views including HTML views, PDF and ePub downloads, according to the available data) and Abstracts Views on Vision4Press platform.

Data correspond to usage on the plateform after 2015. The current usage metrics is available 48-96 hours after online publication and is updated daily on week days.

Initial download of the metrics may take a while.