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All issues Volume 37 (2024) Aquat. Living Resour., 37 (2024) 5 References
Open Access
Issue
Aquat. Living Resour.
Volume 37, 2024
Article Number 5
Number of page(s) 12
DOI https://doi.org/10.1051/alr/2024003
Published online 11 April 2024
  • Alal GW, Barasa JE, Chemoiwa EJ, Kaunda‐Arara B, Akoll P, Masembe C. 2021. Genetic diversity and population structure of selected lacustrine and riverine populations of African catfish, Clarias gariepinus (Burchell, 1822), in Kenya. J Appl Ichthyol 37: 427–438. [CrossRef] [Google Scholar]
  • Bureau of Fishery, Ministry of Agriculture and Affairs of the P.R.C. 2020. China fishery statistical yearbook. China Agricultural Press. [Google Scholar]
  • Chang J, Zhang EL, Luo W, Liu EF, Yang XQ, James S. 2020. A quantitative temperature reconstruction of the ‘Little Ice Age’ in southern China. The Holocene 30: 709–720. [CrossRef] [Google Scholar]
  • Chen LS, Li JL, Liu QG. 2011. Development history of Macrobrachium nipponense industry in China. Fish Sci Technol Inf 38: 35–39. [Google Scholar]
  • Chen PC, Shih CH, Chu TJ, Lee YC, Tzeng TD. 2017. Phylogeography and genetic structure of the oriental river prawn Macrobrachium nipponense (Crustacea: Decapoda: Palaemonidae) in East Asia. PLOS ONE 12: e0173490. [CrossRef] [PubMed] [Google Scholar]
  • Chen SB, Liao CS, Rypel AL., Lian YX, Ye SW, Zhang TL, Liu JS. 2020. Spatial and interspecific comparisons of the reproductive biology of two species of co-occurring freshwater shrimps (Decapoda: Caridea: Palaemonidae) in the Three Gorges Reservoir, China. J Crustac Biol 40: 316–324. [CrossRef] [Google Scholar]
  • Chiang TY, Schaal BA. 1999. Phylogeography of North American populations of the moss species Hylocomium splendens based on the nucleotide sequence of internal transcribed spacer 2 of nuclear ribosomal DNA. Mol Ecol 8: 1037–1042. [CrossRef] [Google Scholar]
  • Cui F, Yu Y, Bao F, Wang S, Xiao MS. 2018. Genetic diversity analysis of the oriental river prawn (Macrobrachium nipponense) in Huaihe River. Mitochondrial Dna Part A 29: 737–744. [CrossRef] [PubMed] [Google Scholar]
  • Darriba D, Taboada GL, Doallo R, Posada D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nat Methods 9: 772–772. [CrossRef] [PubMed] [Google Scholar]
  • Earl D, Vonholdt BM. 2012. STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Conserv Genet Resour 4: 359–361. [CrossRef] [Google Scholar]
  • Evanno G, Regnaut S, Goudet J. 2005. Detecting the number of clusters of individuals using the software structure: a simulation study. Mol Ecol. 14: 2611–2620. [CrossRef] [PubMed] [Google Scholar]
  • Excoffier L, Laval G, Schneider S. 2005. Arlequin (version 3.0): An integrated software package for population genetics data analysis. Evol Bioinforma 1: 47–50. [Google Scholar]
  • Feng JB, Sun YN, Cheng X, Li JL. 2008. Sequence analysis of mitochondrial COI gene of Macrobrachium nipponense from the five largest freshwater lakes in China. J Fish China 32: 517–525. [Google Scholar]
  • Feng MX, Tang YT, Liu RY, Yan X, Hu B, Nie GX, Zhou CJ. 2021. Genetic diversity of Macrobrachium nipponense in Henan Province assessed using mitochondrial COI gene. J Fish Sci China 28: 1548–1558. [Google Scholar]
  • Fu HT, Li FJ, Wu Y, Gong YS, Jiang SF, Xiong YW, Wang N. 2010. Genetic diversity of Macrobrachium nipponense on a regional scale in the Yangtze River. J Fish China 34: 204–212. [CrossRef] [Google Scholar]
  • Fu YB. 2015. Understanding crop genetic diversity under modern plant breeding. Theor Appl Genet 128: 2131–2142. [CrossRef] [PubMed] [Google Scholar]
  • Gong JH. 2006. Treatment for spillway foundation of step No.1 hydropower station of Gudongkou cascade. Hydropower New Energy 2006: 37–41. [Google Scholar]
  • Grant WS, Bowen BW. 1998. Shallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lessons for conservation. J Hered 89: 415–426. [CrossRef] [Google Scholar]
  • Hewitt G. 1996. Some genetic consequences of ice ages, and their role in divergence and speciation. Biol J Linn Soc 58: 247–276. [CrossRef] [Google Scholar]
  • Hewitt G. 2000. The genetic legacy of the Quaternary ice ages. Nature 405: 907–913. [CrossRef] [PubMed] [Google Scholar]
  • Hill CB, Angessa TT, Zhang X, Chen K, Zhou G, Tan C, Wang P, Westcott S, Li C. 2021. A global barley panel revealing genomic signatures of breeding in modern Australian cultivars. Plant J 106: 419–434. [CrossRef] [PubMed] [Google Scholar]
  • Jackson JBC, Kirby MX, Berger WH, Bjorndal KA, Botsford LW, Bourque BJ, Bradbury RH, Cooke R, Erlandson J, Estes JA, Hughes TP, Kidwell S, Lange CB, Lenihan HS, Pandolfi JM, Peterson CH, Steneck RS, Tegner MJ, Warner RR. 2001. Historical Overfishing and the Recent Collapse of Coastal Ecosystems. Science 293: 629–637. [CrossRef] [PubMed] [Google Scholar]
  • Janssen K, Chavanne H, Berentsen P, Komen H. 2017. Impact of selective breeding on European aquaculture. Aquaculture 472: 8–16. [CrossRef] [Google Scholar]
  • Janssen K, Saatkamp H, Komen H. 2018.Cost-benefit analysis of aquaculture breeding programs. Genet. Sel Evol 50: 2. [CrossRef] [Google Scholar]
  • Joanna RF, Heather K, Stephen DP. 2015. Molecular ecology. Higher Education Press. [Google Scholar]
  • Knowlton N, Weigt LA. 1998. New dates and new rates for divergence across the Isthmus of Panama. Proc Royal Soc B: Biol Sci 265: 2257–2263. [CrossRef] [Google Scholar]
  • Kumar S, Stecher G, Tamura K. 2016. MEG A7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Mol Biol Evol 33: 1870–1874. [CrossRef] [PubMed] [Google Scholar]
  • Leigh JW, Bryant D. 2015. Popart: full‐feature software for haplotype network construction. Methods Ecol Evol 6: 1110–1116. [CrossRef] [Google Scholar]
  • Li JJ. 2020. Comparative study on two cultivation models of macrobrachium nipponense (Thesis for the Degree of Master). Baoding, Hebei, China: Hebei University. [Google Scholar]
  • Li XZ, Liu RY, Liang XQ, Chen GX. 2007. Fauna sinica, Crustacea Decapoda Palaemonoidea, Invertebrata. Beijing: Science Press. [Google Scholar]
  • Li Y. 2015. Studies on Morphology and Genetics of Pampus Species (Doctor dissertation). Qingdao, Shandong, China: Ocean University of China. [Google Scholar]
  • Librado P, Rozas J. 2009. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25: 1451–1452. [CrossRef] [PubMed] [Google Scholar]
  • Limburg KE, Waldman JR. 2009. Dramatic declines in North Atlantic Diadromous Fishes. BioScience 59: 955–965. [CrossRef] [Google Scholar]
  • Long T, Wu L, Meng G, Guo W. 2011. Numerical simulation for impacts of hydrodynamic conditions on algae growth in Chongqing Section of Jialing River, China. Ecol Model 222: 112–119. [CrossRef] [Google Scholar]
  • Ma KY, Feng JB, Li JL. 2012. Genetic variation based on microsatellite analysis of the oriental river prawn, Macrobrachium nipponense from Qiandao Lake in China. Genet Mol Res 11: 4235–4244. [Google Scholar]
  • Mirzajani A, Ghane A, Bagheri S, Abbasi K, Sayadrahim M, Salahi M, Lavajoo F. 2020. Diet survey and trophic position of Macrobrachium nipponense in the Food Web of Anzali Wetland. Wetlands 40: 1229–1239. [CrossRef] [Google Scholar]
  • New T, Xie Z. 2008. Impacts of large dams on riparian vegetation: applying global experience to the case of China’s Three Gorges Dam. Biodivers Conserv 17: 3149–3163. [CrossRef] [Google Scholar]
  • Pathirana R, Carimi F. 2022. Management and utilization of plant genetic resources for a sustainable agriculture. Plants 11: 2038. [CrossRef] [PubMed] [Google Scholar]
  • Pritchard JK, Stephens M, Donnelly P. 2000. Inference of population structure using multilocus genotype data. Genetics 155: 945–959. [CrossRef] [PubMed] [Google Scholar]
  • Rambaut A, Drummond AJ. Tracer v 1.5. 2007. http://beast.bio.ed.ac.uk/Tracer. [Google Scholar]
  • Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61: 539–542. [Google Scholar]
  • Ruzich J, Turnquist K, Nye N, Rowe D, Larson WA. 2019. Isolation by a hydroelectric dam induces minimal impacts on genetic diversity and population structure in six fish species. Conserv Genet 20: 1421–1436. [CrossRef] [Google Scholar]
  • Sae-Lim P, Kause A, Mulder HA, Olesen I. 2017. BREEDING AND GENETICS SYMPOSIUM: Climate change and selective breeding in aquaculture. J Anim Sci 95: 1812. [Google Scholar]
  • Sewall Wright. 1978. Evolution and the Genetics of Populations. 4: Variability within and among natural populations. The University of Chicago Press. [Google Scholar]
  • Suchard MA, Lemey P, Baele G, Ayres DL, Drummond AJ, Rambaut A. 2018. Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10. Virus Evol 4: vey016. [CrossRef] [Google Scholar]
  • Wang D, Luo JY, Xiong F, Liu HY, Zhai DD. 2023. Genetic structure of Pseudobrama simoni populations in the mainstream and tributaries of Three Gorges Reservoir. J Hydroecol 44: 124–131. [Google Scholar]
  • Wang H, Jiang H, Duan G, Song G, Ling J, Pan T, Hu Y, Zhou H, Yang M. 2021. The genetic diversity of the rice-crayfish eco-farming Procambarus clarkii in Anhui Province, China. Turk J Fish Aquat Sci 22: TRJFAS19904. [Google Scholar]
  • Wang JP, Hsu KC, Chiang TY. 2000. Mitochondrial DNA phylogeography of Acrossocheilus paradoxus (Cyprinidae) in Taiwan. Mol Ecol 9: 1483–1494. [CrossRef] [PubMed] [Google Scholar]
  • Wang Z, Wu Q, Zhou J, Ye Y, Tong J. 2003. Silver Carp, Hypophthalmichthys molitrix, in the Poyang Lake belong to the Ganjiang River Population Rather than the Changjiang River Population. Environ. Biol Fishes 68: 261–267. [Google Scholar]
  • Wei Z. 2022. The complete mitochondrial genomes of five Agrilinae (Coleoptera, Buprestidae) species and phylogenetic implications. ZooKeys 1092: 195–212. [CrossRef] [PubMed] [Google Scholar]
  • Xiang R, Wang L, Li H, Tian Z, Zheng B. 2021. Water quality variation in tributaries of the Three Gorges Reservoir from 2000 to 2015. Water Res 195: 116993. [CrossRef] [PubMed] [Google Scholar]
  • Xiang R, Wang L, Li H, Tian Z, Zheng B. 2021. Temporal and spatial variation in water quality in the Three Gorges Reservoir from 1998 to 2018. Sci Total Environ 768: 144866. [CrossRef] [PubMed] [Google Scholar]
  • Xiong Y, Jiang S, Zhang L, Wang J, Zhang W, Jin S, Gong Y, Wu Y, Qiao H, Fu H. 2023. Genetic diversity and structure assessment of Macrobrachium nipponense populations: implications for the protection and management of genetic resources. Aquat Living Resour 36:5. [CrossRef] [EDP Sciences] [Google Scholar]
  • Xu X, Tan Y, Yang G, Li H, Su W. 2011. Impacts of China’s Three Gorges Dam Project on net primary productivity in the reservoir area. Sci Total Environ 409: 4656–4662. [CrossRef] [PubMed] [Google Scholar]
  • Yang HF, Yang SL, Xu KH, Milliman JD, Wang H, Yang Z, Chen Z, Zhang CY. 2018. Human impacts on sediment in the Yangtze River: A review and new perspectives. Glob Planet Change 162: 8–17. [CrossRef] [Google Scholar]
  • Yang ZB, Liu YY, He RT, Yang K, Ayi QL, Xie SG, Kang YH, Zheng B. 2018. Responses of benthic macroinvertebrates in tributaries of different hydrological regimes in the Three Gorges Reservoir region to reservoir impoundment. Acta Ecol Sin 38: 7231–7241. [Google Scholar]
  • Zhou X, Jiang D, Lang X. 2019. A multi-model analysis of ‘Little Ice Age’ climate over China. The Holocene 29: 592–605. [CrossRef] [Google Scholar]
  • Zhu KZ. 1973. A preliminary study of climate change in China during the last five thousand years. Meteorol. Sci Technol S1: 1–23. [Google Scholar]

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