Free Access
Issue
Aquat. Living Resour.
Volume 23, Number 3, July-September 2010
Page(s) 315 - 323
DOI https://doi.org/10.1051/alr/2010027
Published online 24 December 2010
  • Aoki M., Naruse T., Cheng J.H., Suzuki Y., Imai H., 2008, Low genetic variability in an endangered population of fiddler crab Uca arcuata on Okinawajima Island: analysis of mitochondrial DNA. Fish. Sci. 74, 330-340. [CrossRef] [Google Scholar]
  • Aris-Brosou S., Excoffier L., 1996, The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism. Mol. Biol. Evol. 13, 494–504. [PubMed] [Google Scholar]
  • Aubert H., Lightner D.V., 2000 Identification of genetic populations of the Pacific blue shrimp Penaeus stylirostris of the Gulf of California, Mexico. Mar. Biol. 137, 875–885. [CrossRef] [Google Scholar]
  • Avise J.C., 2000, Phylogeography, the history and formation of species. Harvard University Press, Cambridge. [Google Scholar]
  • Begg, G.A., Friedland, K.D., Pearce J.B., 1999, Stock identification and its role in stock assessment and fisheries management: an overview. Fish. Res. 43, –8. [Google Scholar]
  • Barber P.H., Palumbi S.R., Erdmann M.V., Moosa M.K., 2002, Sharp genetic breaks among populations of Haptosquilla pulchella (Stomatopoda) indicate limits to larval transport: patterns, causes, and consequences. Mol. Ecol. 11, 659–674. [CrossRef] [PubMed] [Google Scholar]
  • Benzie J.A.H., 2000, Population genetic structure in Penaeid prawns. Aquac. Res. 31, 95–119. [CrossRef] [Google Scholar]
  • Benzie J.A.H., Kenway M., Ballment E., Frusher S., Trott L., 1995, Interspecific hybridization of the tiger prawns Penaeus monodon and Penaeus esculentus. Aquaculture 133, 103–111. [CrossRef] [Google Scholar]
  • Benzie J.A.H., Ballment E., Forbes A.T., Demetriades N.T., Sugama K., Haryanti, Moria S., 2002, Mitochondrial DNA variation in Indo-Pacific populations of the giant tiger prawn, Penaeus monodon. Mol. Ecol. 11, 2553–2569. [Google Scholar]
  • Brooker A.L., Benzie J.A.H., Blair D., Versini J.J., 2000, Population structure of the giant tiger prawn Penaeus monodon in Australian waters, determined using microsatellite markers. Mar. Biol. 136, 149–157. [CrossRef] [Google Scholar]
  • Carvalho G.R., Hauser L., 1994, Molecular genetics and the stock concept in fisheries. Rev. Fish Biol. Fish 4, 326–350. [CrossRef] [Google Scholar]
  • Castro J.A., Picornell A., Ramon M., 1998, Mitochondrial DNA: a tool for populational genetics studies. Internat. Microbiol. 1, 327–332. [Google Scholar]
  • Couceiro L., Barreiro R., Ruize J.M., Sotka E.E., 2007, Genetic isolation by distance among populations of the netted dog whelk Nassarius reticulatus (L.) along the European Atlantic Coastline. J. Hered. 98, 603–610. [CrossRef] [PubMed] [Google Scholar]
  • Cowen R.K., Lwiza K.M.M., Sponaugle S., Paris C.B., Olson D.B., 2000, Connectivity of marine populations: open or closed? Science 287, 857–859. [CrossRef] [PubMed] [Google Scholar]
  • Cui Z., Li C.P., Jang I.K., Chu K.H., 2007, Lack of genetic differentiation in the shrimp Penaeus chinensis in the Northwestern Pacific. Biochem. Genet. 45, 579–588. [CrossRef] [PubMed] [Google Scholar]
  • Dall W., Hill B.J., Rothlisberg P.C., Staples D.J., 1990, The biology of the Penaeidae. Blaxter J.H.S., Southward A.J. (Eds.). Adv. Mar. Biol. 27, 1–489. [Google Scholar]
  • De Bruin G.H.P, Russell B.C., Bogusch A., 1994, The Marine Fishery Resources of Sri Lanka, FAO species Identification guide for fishery purposes. FAO, Rome. [Google Scholar]
  • Davenport J., Ekaratne S.U.K., Walgama S.A., Lee D., Hills J.M., 1999, Successful stock enhancement of lagoon prawn fishery at Rekawa, Sri Lanka using cultured post larvae of penaeid shrimp. Aquaculture 180, 65–78. [CrossRef] [Google Scholar]
  • Dupanloup I., Schneider S., Excoffier L., 2002, A simulated annealing approach to define the genetic structure of populations. Mol. Ecol. 11, 2571–2581. [CrossRef] [PubMed] [Google Scholar]
  • Excoffier L., Yer L., Laval G., Schneider S., 2006, Arlequin vers. 3.0: an integrated software package for population genetics data analysis. Evol. Bioinform. Online 1, 47–50. [Google Scholar]
  • Fischer W., Bianchi G., 1984, FAO species identification sheets for fishery purposes. Western Indian Ocean Fishing Area 51, Rome, FAO. [Google Scholar]
  • Folmer O., Black M., Hoeh W., Lutz, R.,Vrijenhoek R., 1994, DNA primers for amplification of mitochondrial cytochrome C oxidase subunit I from diverse metazoan invertebrates. Mol. Mar. Biol. Biotechnol 3, 285–294. [Google Scholar]
  • Garcia-Machado E., Robainas A., Espinosa G., Oliva M., Paez J., Verdecia N., Monnerot M., 2001, Allozyme and mitochondrial DNA variation in Cuban populations of the shrimp Farfantepenaeus notialis (Crustacea: Decapoda). Mar. Biol. 138, 701–707. [CrossRef] [Google Scholar]
  • Glenn T.C., Stephan W., Braun M.J., 1999, Effects of a population bottleneck on whooping crane mitochondrial DNA variation. Conserv. Biol. 13, 1097–1107. [CrossRef] [Google Scholar]
  • Grosberg R., Cunningham C.W., 2001, Genetic structure in the sea: from populations to communities. In: Bertness M.D., Gaines S, Hay M.E. (Eds.) Marine community ecology Sunderland (MA), Sinauer Associates, pp. 61–84 [Google Scholar]
  • Gulland J.A., Rothschild B.J. (Eds.), 1984, Penaeid Shrimps-Their Biology and Management. Fishing New Books, Farnham, UK. [Google Scholar]
  • Hall, T.A., 1999, BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41, 95-98. [Google Scholar]
  • Hawkins S.J., Hartnoll R.G., 1982, Settlement patterns of Semibalanus balanoides (L.) in the Isle of Man (1977–1981). J. Exp. Mar. Biol. Ecol. 62, 271–283. [CrossRef] [Google Scholar]
  • Hayashi K., 2000, Prawns Shrimps and Lobsters from Japan (113). Family Palaemonidae, Subfamily Palaemonidae Genus Macrobrachium (2). Aquabiology 22, 361–362. [Google Scholar]
  • Hayashi K., Aoyama M., Fujiwara S., Yu H.P., 1992, Indian white prawn Penaeus (Fenneropenaeus) new to the Japanese fauna. Nippon Suisan Gakkaishi 58, 167. [Google Scholar]
  • Hellberg M.E., 2009, Gene flow and Isolation among population of marine animals. Ann. Rev. Ecol. Evol. System. 40, 291–310. [CrossRef] [Google Scholar]
  • Jayawardene P.A.A.T., Mclusky D.S., Tytler P., 2004, Present status of the shrimp trawl fishery in the seas off Negombo and Hendala on the western coastal waters of Sri Lanka. Ceylon J. Sci. 32, 21–37. [Google Scholar]
  • Jayawardene P.A.A.T., McLusky D.S., Tytler P., 2002a, Estimation of population parameters and stock assessment of Penaeus indicus (H. Milne Edwards) in the Western Coastal Waters of Sri Lanka. Asian Fish. Sci. 15, 155–166. [Google Scholar]
  • Jayawardene P.A.A.T., McLusky D.S., Tytler P., 2002b, Reproductive biology of Penaeus indicus (H. Milne Edwards, 1837) from the Western Coastal Waters of Sri Lanka. Asian Fish. Sci. 15, 315–328. [Google Scholar]
  • Jayawardane P.A.A.T., Perera H.A., 2003, Observations on the artisanal stake net fishery for shrimps in the Negombo Lagoon, Sri Lanka. Fish. Manage. Ecol. 10, 41–50. [CrossRef] [Google Scholar]
  • Klinbunga S., Siludji D., Wudthijinda W., Tassanakajon A., Jarayabhand P., Menasveta P., 2001, Genetic heterogeneity of giant tiger shrimp (Penaeus monodon) in Thailand revealed by RADP and mitrochondrial DNA RFLP analysis. Mar. Biotechnol. 3, 428–438. [CrossRef] [PubMed] [Google Scholar]
  • Klinbunga S., Penman D.J., McAndrew B.J., Tassanakajon A., 1999, Mitochondrial DNA diversity in three populations of the giant tiger shrimp Penaeus monodon. Mar. Biotechnol. 1, 113–121. [Google Scholar]
  • Knowlton N., Weigt L.A., 1998, New dates and new rates for divergence across the Isthmus of Panama. Proc. R. Soc. B: Biol. Sci. 265, 2257–2263. [Google Scholar]
  • Kong X.Y., Li Y.L., Shi W., Kong J., 2010, Genetic variation and evolutionary demography of Fenneropenaeus chinensis populations, as revealed by the analysis of mitochondrial control region sequences. Genet. Mol. Biol. 33, 2, 379–389. [PubMed] [Google Scholar]
  • Leung P., Engle C., 2006, Shrimp culture: economics, market, and trade. World Aquaculture Society and Blackwell Publishing. [Google Scholar]
  • Luttikhuizen P.C., Campos J., Bleijswijk J., Peijnenburg K.T.C.A., van der Veer H.W., 2008, Phylogeography of the common shrimp, Crangon crangon (L.) across its distribution range. Mol. Phylogenet. Evol. 46, 101–1030 [Google Scholar]
  • McMillen-Jackson A.L., Bert T.M., 2004a, Genetic diversity in the mitochondrial DNA control region and population structure in the pink shrimp Farfantepenaeus duorarum. J. Crust. Biol. 24, 101–109. [CrossRef] [Google Scholar]
  • McMillen-Jackson A.L., Bert T.M., 2004b, Mitochondrial DNA variation and population genetic structure of the blue crab Callinectes sapidus in the eastern United States. Mar. Biol. 145, 76–777. [Google Scholar]
  • McMillen-Jackson A.L., Bert T.M., 2003, Disparate patterns of population genetic structure and population history in two sympatric penaeid shrimp species (Farfantepenaeus aztecus and Litopenaeus setiferus) in the eastern United States. Mol. Ecol. 12, 2895–2905. [CrossRef] [PubMed] [Google Scholar]
  • Mantel N., 1967, The detection of disease clustering and a generalised regression approach. Cancer Res. 27, 209–220. [PubMed] [Google Scholar]
  • Mohan R., Siddeek M.S.M., 1995, Biology of Indian white shrimp, Penaeus indicus H. Milne Edwards (Decapoda, Penaeidae) in the Gulf of Masirah, Sultanate of Oman. Arch. Hydrobiol. 135, 259–270. [Google Scholar]
  • Moore S.S., Whan V.G.P., Davis K., Byre D.J.S., Hetzel N., Preston, 1999, The development and application of genetic markers for the Kuruma prawn Penaeus japonicus. Aquaculture 173, 19–32. [CrossRef] [Google Scholar]
  • Palumbi S.R., 2003, Population genetics, demographic connectivity, and the design of marine reserves. Ecol. Appl. 13 (Suppl.), 146–S158. [Google Scholar]
  • Park L.K., Moran P., 1994, Development in molecular genetics techniques in fisheries. Rev. Fish Biol. Fish. 4, 272–299. [CrossRef] [Google Scholar]
  • Pineda J., 1999, Circulation and larval distribution in internal tidal bore warm fronts. Limnol. Oceanogr. 44, 1400–1414. [CrossRef] [Google Scholar]
  • Pineda J., 1994, Internal tidal bores in the near shore: warm-water fronts, seaward gravity currents and the onshore transport of neustonic larvae. J. Mar. Res. 52, 427–458. [CrossRef] [Google Scholar]
  • Rogers A.R., Harpending H., 1992, Population growth makes waves in the distribution of pairwise genetic differences. Mol. Biol. Evol. 9, 552–569. [Google Scholar]
  • Roldan M.I., Heras S., Patellani R., Maltagliati F., 2009, Analysis of genetic structure of the red shrimp Aristeus antennatus from the Western Mediterranean employing two mitochondrial regions. Genetica 136, 1–4. [CrossRef] [Google Scholar]
  • Schott F.A., McCreary J.P., 2001, The monsoon circulation of the Indian Ocean. Prog. Oceanogr. 51, 1–123. [Google Scholar]
  • Shanks A.L., 1983, Surface slicks associated with tidally forced internal waves may transport pelagic larvae of benthic invertebrates and fishes shoreward. Mar. Ecol. Prog. Ser. 13, 311–315 [CrossRef] [Google Scholar]
  • Shanks A.L., Eckert G.L., 2005, Life-history traits and population persistence of California Current fishes and benthic crustaceans: a marine drift paradox. Ecol. Monogr. 75, 505–524. [CrossRef] [Google Scholar]
  • Smakhtin V.U., Piyankarage S.C., 2003, Simulating hydrologic reference condition of coastal lagoons affected by irrigation flows in southern Sri Lanka. Wetlands 23, 827–834. [CrossRef] [Google Scholar]
  • Sokal R.R., Rohlf F.J., 1995, Biometry: the principles and practice of statistics in biological research, WH Freeman, New York. [Google Scholar]
  • Tamura K., Nei M., 1993, Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 7, 512–526. [Google Scholar]
  • Thorrold S.R., Jones G.F., Hellberg M.E., Burton R.S., Swearer S.E., Niegel J.E., Morgan S.G., Warner R.R., 2002, Quantifying larval retention and connectivity in marine populations with artificial and natural markers. Bull. Mar. Sci. 70, 291–308. [Google Scholar]
  • Valles-Jimenez R., Gaffney P.M., Perez-Enriquez R., 2006, RFLP analysis of the mtDNA control region in white shrimp (Litopenaeus vannamei) populations from the eastern Pacific. Mar. Biol. 148, 867–873. [CrossRef] [Google Scholar]
  • Vinayachandran P.N., Chauhan P., Mohan M., Nayak S., 2004, Biological response of the sea around Sri Lanka to summer monsoon. Geophys. Res. Lett. 31, L01302. [CrossRef] [Google Scholar]
  • Voris H.K., 2000, Maps of Pleistocene sea levels in Southeast Asia: shorelines, river systems and time durations. J. Biogeogr. 27, 1153–1167. [CrossRef] [Google Scholar]
  • You E.M., Chiu T.S., Liu, K.F., Tassanakajon A., Klinbunga S., Triwitayakorn K., de La Pe L.D., Li Y., Yu H.T., 2008, Microsatellite and mitochondrial haplotype diversity reveals population differentiation in the tiger shrimp (Penaeus monodon) in the Indo-Pacific region. Anim. Genet. 39, 267–277. [CrossRef] [PubMed] [Google Scholar]

Current usage metrics show cumulative count of Article Views (full-text article views including HTML views, PDF and ePub downloads, according to the available data) and Abstracts Views on Vision4Press platform.

Data correspond to usage on the plateform after 2015. The current usage metrics is available 48-96 hours after online publication and is updated daily on week days.

Initial download of the metrics may take a while.