Table 4
Summary of the neutral test and goodness-of-fit test for P. chinensis.
| Groups | n | N | Tajima’s D | Fu’s Fs | Goodness-of-fit test | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
|
|
|||||||||
| D | P | Fs | P | τ | θ 0 | θ 1 | SSD | HRI | |||
| All | 84 | 26 | −0.094 | 0.480 | −2.454 | 0.079 | 10.555 | 0.000 | 7.200 | 0.058 ns | 0.072 ns |
| Lineage A | 37 | 13 | −0.547 | 0.347 | −3.406 | 0.044 | 1.373 | 0.000 | 99999 | 0.030 ns | 0.065 ns |
| Lineage B | 47 | 13 | −0.468 | 0.721 | −0.987 | 0.036 | 7.705 | 0.002 | 8.076 | 0.034 ns | 0.066 ns |
Note: Number of individuals (n), number of haplotypes (N), Tajima's D and Fu's FS , corresponding P-value, and mismatch distribution parameter estimates for each lineage are also indicated. τ (95% CI) is the time of initiation of population expansion; θ 0 and θ 1 are the θ parameters before and after expansion, respectively; SSD and HRI are the sum of squared deviations and raggedness index, respectively. ns, P > 0.05.
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